Transcript: lnc-RAD23B-8:6

Basic information

LNCipedia transcript ID: lnc-RAD23B-8:6 
LNCipedia gene ID: lnc-RAD23B-8
Location (hg38): chr9:107566826-107569258
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 572 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016667; NONHSAT133886
Alternative gene names: XLOC_007508; linc-ACTL7A-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -128.2548 non-coding 
CPAT coding probability 1.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAD23B-8:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RAD23B-6:1
3.1 lnc-RAD23B-6:2
4.0 lnc-RAD23B-8:6
4.1 lnc-RAD23B-8:6
5.0 lnc-RAD23B-8:6
5.1 lnc-PRPF4-107:2
5.2 lnc-RAD23B-8:6