Transcript: lnc-RAD52-2:2

Basic information

LNCipedia transcript ID: lnc-RAD52-2:2 
LNCipedia gene ID: lnc-RAD52-2
Ensembl Gene ID: ENSG00000250132
Ensembl Transcript ID: ENST00000545629
Location (hg38): chr12:976804-991122
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 569 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT025378; ENST00000545629.1; ENST00000545629.5
Alternative gene names: ENSG00000250132.2; RP11-359B12.2; ENSG00000250132.6; AC004803.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.912 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAD52-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NINJ2-2:3
4.0 lnc-RAD52-2:2
4.1 lnc-RAD52-2:2
5.0 lnc-RAD52-2:2
5.1 lnc-CHD4-114:2
5.2 lnc-RAD52-2:2