Transcript: lnc-RAD54L2-5:1

Basic information

LNCipedia transcript ID: lnc-RAD54L2-5:1 
LNCipedia gene ID: lnc-RAD54L2-5
Location (hg38): chr3:51500381-51503207
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1300 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000060149.1|MICT00000243083.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -16.852 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAD54L2-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RAD54L2-5:1
5.0 lnc-RAD54L2-5:1
5.1 lnc-SPCS1-34:1
5.2 lnc-RAD54L2-5:1