Transcript: lnc-RALB-2:2

Basic information

LNCipedia transcript ID: lnc-RALB-2:2 
LNCipedia gene ID: lnc-RALB-2
Ensembl Gene ID: ENSG00000235840
Ensembl Transcript ID: ENST00000437837
Location (hg38): chr2:120319007-120326298
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 555 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00002990; ENST00000437837; ENST00000437837.1; AC012363.13-001; OTTHUMT00000338463.1; NONHSAT073998
Alternative gene names: XLOC_001640; linc-INHBB; ENSG00000235840; AC012363.13; ENSG00000235840.1; OTTHUMG00000155116.1; AC012363.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -107.7192 non-coding 
CPAT coding probability 6.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RALB-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-INHBB-1:2
3.1 lnc-RALB-2:2
4.0 lnc-RALB-2:2
4.1 lnc-RALB-2:2
5.0 lnc-RALB-2:2
5.1 lnc-TMEM37-18:2
5.2 lnc-RALB-2:2