Transcript: lnc-RANBP3L-4:4

Basic information

LNCipedia transcript ID: lnc-RANBP3L-4:4 
LNCipedia gene ID: lnc-RANBP3L-4
Ensembl Gene ID: ENSG00000250155
Ensembl Transcript ID: ENST00000510740
Location (hg38): chr5:36666214-36725173
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 478 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000510740.1; CTD-2353F22.1-003; OTTHUMT00000366969.1; NONHSAT101039
Alternative gene names: ENSG00000250155.1; CTD-2353F22.1; OTTHUMG00000162032.1; AC008957.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -207.121 non-coding 
CPAT coding probability 0.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RANBP3L-4:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C5orf42-3:3
4.0 lnc-RANBP3L-4:4
4.1 lnc-RANBP3L-4:4
5.0 lnc-RANBP3L-4:4
5.1 lnc-SELENOP-76:4
5.2 lnc-RANBP3L-4:4