Transcript: lnc-RANBP3L-5:2

Basic information

LNCipedia transcript ID: lnc-RANBP3L-5:2 
LNCipedia gene ID: lnc-RANBP3L-5
Location (hg38): chr5:36581801-36606865
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 447 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000079525.1|HBMT00001160383.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -42.817 non-coding 
CPAT coding probability 2.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RANBP3L-5:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RANBP3L-5:2
5.0 lnc-RANBP3L-5:2
5.1 lnc-SELENOP-78:2
5.2 lnc-RANBP3L-5:2