Transcript: lnc-RASGRP1-2:1

Basic information

LNCipedia transcript ID: lnc-RASGRP1-2:1 
LNCipedia gene ID: lnc-RASGRP1-2
Location (hg38): chr15:38756554-38759413
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 821 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000560675.1; RP11-326N17.1-001; OTTHUMT00000418239.1; NONHSAT041721
Alternative gene names: ENSG00000259731.1; RP11-326N17.1; OTTHUMG00000172383.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -143.9441 non-coding 
CPAT coding probability 1.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RASGRP1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RASGRP1-2:1
4.0 lnc-RASGRP1-2:1
4.1 lnc-RASGRP1-2:1
5.0 lnc-RASGRP1-2:1
5.1 lnc-VPS39-62:1
5.2 lnc-RASGRP1-2:1