Transcript: lnc-RASL11B-4:1

Basic information

LNCipedia transcript ID: lnc-RASL11B-4:1 
LNCipedia gene ID: lnc-RASL11B-4
Ensembl Gene ID: ENSG00000260120
Ensembl Transcript ID: ENST00000564513
Location (hg38): chr4:52680609-52692649
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1741 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000564513.1; RP11-177B4.2-001; OTTHUMT00000431744.1; NONHSAT096367
Alternative gene names: ENSG00000260120.1; RP11-177B4.2; OTTHUMG00000176307.1; AC104066.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.1241 non-coding 
CPAT coding probability 23.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RASL11B-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RASL11B-4:1
4.0 lnc-RASL11B-4:1
4.1 lnc-RASL11B-4:1
5.0 lnc-RASL11B-4:1
5.1 lnc-CEP135-59:1
5.2 lnc-RASL11B-4:1