Transcript: lnc-RBBP9-10:1

Basic information

LNCipedia transcript ID: lnc-RBBP9-10:1 
LNCipedia gene ID: lnc-RBBP9-10
Location (hg38): chr20:19190302-19232596
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1789 bp
Exons: 8
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_2291_NR_024564
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.5915 non-coding 
CPAT coding probability 10.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RBBP9-10:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C20orf78-3:2
4.0 lnc-C20orf78-3:2
4.1 lnc-C20orf78-3:2
5.0 lnc-C20orf78-3:2
5.1 lnc-RRBP1-39:1
5.2 lnc-RBBP9-10:1