Transcript: lnc-RBFOX2-1:1

Basic information

LNCipedia transcript ID: lnc-RBFOX2-1:1 
LNCipedia gene ID: lnc-RBFOX2-1
Location (hg38): chr22:35627112-35631459
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 594 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT085067
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -50.8605 non-coding 
CPAT coding probability 1.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RBFOX2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RBFOX2-1:1
4.0 lnc-RBFOX2-1:1
4.1 lnc-RBFOX2-1:1
5.0 lnc-RBFOX2-1:1
5.1 lnc-APOL3-7:2
5.2 lnc-RBFOX2-1:1