Transcript: lnc-RBL2-1:4

Basic information

LNCipedia transcript ID: lnc-RBL2-1:4 
LNCipedia gene ID: lnc-RBL2-1
Ensembl Gene ID: ENSG00000262714
Ensembl Transcript ID: ENST00000571340
Location (hg38): chr16:53386944-53389085
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2142 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000571340.1; RP11-44F14.8-001; OTTHUMT00000433143.2; NONHSAT142574
Alternative gene names: ENSG00000262714.1; RP11-44F14.8; OTTHUMG00000176690.2; AC007342.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.0963 non-coding 
CPAT coding probability 0.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RBL2-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RBL2-1:4
4.0 lnc-RBL2-1:4
4.1 lnc-RBL2-1:4
5.0 lnc-RBL2-1:4
5.1 lnc-ADGRG1-99:11
5.2 lnc-RBL2-1:4