Transcript: lnc-RBM11-10:2

Basic information

LNCipedia transcript ID: lnc-RBM11-10:2 
LNCipedia gene ID: lnc-RBM11-10
Location (hg38): chr21:14761710-14763090
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 695 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: TCONS_00028792; ENST00000435315; ENST00000435315.1; AF127936.5-001; OTTHUMT00000157919.1; NONHSAT081176
Alternative gene names: XLOC_013862; linc-USP25-4; ENSG00000226751; AF127936.5; ENSG00000226751.1; OTTHUMG00000074319.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -207.8543 non-coding 
CPAT coding probability 0.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RBM11-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AF127577.1-4:1
3.1 lnc-AF127577.1-6:1
4.0 lnc-AF127577.1-6:1
4.1 lnc-AF127577.1-6:1
5.0 lnc-AF127577.1-6:1
5.1 lnc-OLIG1-141:2
5.2 lnc-RBM11-10:2