Transcript: lnc-RBM4-2:2

Basic information

LNCipedia transcript ID: lnc-RBM4-2:2 
LNCipedia gene ID: lnc-RBM4-2
Location (hg38): chr11:66677831-66685321
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1095 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000002693.1|MICT00000061771.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.6879 non-coding 
CPAT coding probability 3.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RBM4-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RBM4-2:2
5.0 lnc-RBM4-2:2
5.1 lnc-C11orf80-2:2
5.2 lnc-RBM4-2:2