Transcript: lnc-RCBTB2-1:1

Basic information

LNCipedia transcript ID: lnc-RCBTB2-1:1 
LNCipedia gene ID: lnc-RCBTB2-1
Location (hg38): chr13:48568162-48570343
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 329 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022004; NONHSAT033719
Alternative gene names: XLOC_010605; linc-RCBTB2-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -437.2064 non-coding 
CPAT coding probability 1.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RCBTB2-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RCBTB2-1:1
3.1 lnc-RCBTB2-1:1
4.0 lnc-RCBTB2-1:1
4.1 lnc-RCBTB2-1:1
5.0 lnc-RCBTB2-1:1
5.1 lnc-CCDC169-143:1
5.2 lnc-RCBTB2-1:1