Transcript: lnc-RDX-5:1

Basic information

LNCipedia transcript ID: lnc-RDX-5:1 
LNCipedia gene ID: lnc-RDX-5
Location (hg38): chr11:110427214-110429169
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 523 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_541_chr11:110297937-110299893_breast
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.9457 non-coding 
CPAT coding probability 2.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RDX-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RDX-5:1
4.0 lnc-RDX-5:1
4.1 lnc-RDX-5:1
5.0 lnc-RDX-5:1
5.1 lnc-ARHGAP20-5:2
5.2 lnc-RDX-5:1