Transcript: lnc-RECQL4-2:4

Basic information

LNCipedia transcript ID: lnc-RECQL4-2:4 
LNCipedia gene ID: lnc-RECQL4-2
Ensembl Gene ID: ENSG00000255182
Ensembl Transcript ID: ENST00000569326
Location (hg38): chr8:144495458-144500280
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3392 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000569326.2
Alternative gene names: ENSG00000255182.2; CTD-2517M22.14; AC084125.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 140.612 coding 
CPAT coding probability 94.67% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RECQL4-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CTD-2517M22.14.1-1:6
4.1 lnc-CTD-2517M22.14.1-1:6
5.0 lnc-CTD-2517M22.14.1-1:6
5.1 lnc-TMEM249-19:4
5.2 lnc-RECQL4-2:4