Transcript: lnc-REEP3-2:6

Basic information

LNCipedia transcript ID: lnc-REEP3-2:6 
LNCipedia gene ID: lnc-REEP3-2
Location (hg38): chr10:63872589-64576069
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1491 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228566.1|MICT00000042871.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -43.1933 non-coding 
CPAT coding probability 27.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-REEP3-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-REEP3-2:6
5.0 lnc-REEP3-2:6
5.1 lnc-MTRNR2L5-54:5
5.2 lnc-REEP3-2:6