Transcript: lnc-REEP3-49:1

Basic information

LNCipedia transcript ID: lnc-REEP3-49:1 
LNCipedia gene ID: lnc-REEP3-49
RefSeq ID: NR_134312
Location (hg38): chr10:63430575-63431202
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 479 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134312.1
Alternative gene names: LOC105378330


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.4977 non-coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-REEP3-49:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MTRNR2L5-49:1
5.1 lnc-MTRNR2L5-49:1
5.2 lnc-REEP3-49:1