Transcript: lnc-REL-6:2

Basic information

LNCipedia transcript ID: lnc-REL-6:2 
LNCipedia gene ID: lnc-REL-6
Location (hg38): chr2:60930026-60940021
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2795 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT070916
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
DVIEEYFK 100% antisense-2
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.8519 non-coding 
CPAT coding probability 6.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-REL-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-REL-1:4
4.0 lnc-REL-1:4
4.1 lnc-REL-1:4
5.0 lnc-REL-1:4
5.1 lnc-PAPOLG-15:2
5.2 lnc-REL-6:2