Transcript: lnc-REXO5-1:1

Basic information

LNCipedia transcript ID: lnc-REXO5-1:1 
LNCipedia gene ID: lnc-REXO5-1
Location (hg38): chr16:20674510-20755608
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 839 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT140938
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 52.758 non-coding 
CPAT coding probability 13.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-REXO5-1:1 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC004381.6.1-1:2
4.0 lnc-AC004381.6.1-1:2
4.1 lnc-AC004381.6.1-1:2
5.0 lnc-AC004381.6.1-1:2
5.1 lnc-TMC5-26:1
5.2 lnc-REXO5-1:1