Transcript: lnc-RFC4-1:3

Basic information

LNCipedia transcript ID: lnc-RFC4-1:3 
LNCipedia gene ID: lnc-RFC4-1
Location (hg38): chr3:186781780-186784114
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2335 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000263826.1|ENST00000577781.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -92.3007 non-coding 
CPAT coding probability 1.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RFC4-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RFC4-1:3
5.0 lnc-RFC4-1:3
5.1 lnc-TBCCD1-1:6
5.2 lnc-RFC4-1:3