Transcript: lnc-RFLNA-4:2

Basic information

LNCipedia transcript ID: lnc-RFLNA-4:2 
LNCipedia gene ID: lnc-RFLNA-4
Location (hg38): chr12:124552875-124617289
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2264 bp
Exons: 10
Sources: Nielsen et al.,2014
Alternative transcript names: l_750_chr12:125037420-125094015_placenta
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.8273 non-coding 
CPAT coding probability 18.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RFLNA-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM101A-4:1
4.0 lnc-FAM101A-4:1
4.1 lnc-FAM101A-4:1
5.0 lnc-FAM101A-4:1
5.1 lnc-RFLNA-4:1
5.2 lnc-RFLNA-4:2