Transcript: lnc-RFPL4B-1:1

Basic information

LNCipedia transcript ID: lnc-RFPL4B-1:1 
LNCipedia gene ID: lnc-RFPL4B-1
RefSeq ID: NR_121193
Location (hg38): chr6:112236596-112306683
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 536 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000433684.1; RP11-506B6.6-001; OTTHUMT00000041887.1; NR_121193; NR_121193.1
Alternative gene names: ENSG00000226440.1; RP11-506B6.6; OTTHUMG00000015392.1; LOC101927640


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -234.3641 non-coding 
CPAT coding probability 1.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RFPL4B-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RFPL4B-1:1
4.0 lnc-RFPL4B-1:1
4.1 lnc-RFPL4B-1:1
5.0 lnc-RFPL4B-1:1
5.1 lnc-RFPL4B-1:1
5.2 lnc-RFPL4B-1:1