Transcript: lnc-RFPL4B-1:3

Basic information

LNCipedia transcript ID: lnc-RFPL4B-1:3 
LNCipedia gene ID: lnc-RFPL4B-1
Location (hg38): chr6:112236093-112306683
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 1039 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000433684.3
Alternative gene names: ENSG00000226440.3; RP11-506B6.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -176.9653 non-coding 
CPAT coding probability 1.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RFPL4B-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RFPL4B-1:3
4.0 lnc-RFPL4B-1:3
4.1 lnc-RFPL4B-1:3
5.0 lnc-RFPL4B-1:3
5.1 lnc-RFPL4B-1:3
5.2 lnc-RFPL4B-1:3