Transcript: lnc-RGMA-19:2

Basic information

LNCipedia transcript ID: lnc-RGMA-19:2 
LNCipedia gene ID: lnc-RGMA-19
Location (hg38): chr15:95812732-95872193
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 13979 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000026017.1|ENCT00000152612.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.3673 non-coding 
CPAT coding probability 1.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RGMA-19:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC016251.1-18:2
5.0 lnc-AC016251.1-18:2
5.1 lnc-CIB1-58:2
5.2 lnc-RGMA-19:2