Transcript: lnc-RGPD8-56:1

Basic information

LNCipedia transcript ID: lnc-RGPD8-56:1 
LNCipedia gene ID: lnc-RGPD8-56
RefSeq ID: NR_136321
Location (hg38): chr2:112541656-112542212
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 433 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136321.1
Alternative gene names: LOC105373562


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -268.5024 non-coding 
CPAT coding probability 3.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RGPD8-56:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-EN1-56:1
5.1 lnc-EN1-56:1
5.2 lnc-RGPD8-56:1