Transcript: lnc-RGS1-1:6

Basic information

LNCipedia transcript ID: lnc-RGS1-1:6 
LNCipedia gene ID: lnc-RGS1-1
Ensembl Gene ID: ENSG00000236069
Ensembl Transcript ID: ENST00000642657
Location (hg38): chr1:192517190-192538102
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1264 bp
Exons: 3
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000642657.1
Alternative gene names: ENSG00000236069.2; AL136987.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -11.7859 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RGS1-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CFHR3-61:5
5.1 lnc-CFHR3-61:5
5.2 lnc-RGS1-1:6