Transcript: lnc-RGS9-11:3

Basic information

LNCipedia transcript ID: lnc-RGS9-11:3 
LNCipedia gene ID: lnc-RGS9-11
Location (hg38): chr17:64976153-64977542
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1390 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000032120.1|HBMT00000607969.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.622 non-coding 
CPAT coding probability 8.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RGS9-11:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC037487.1-11:2
5.0 lnc-AC037487.1-11:2
5.1 lnc-TANC2-64:2
5.2 lnc-RGS9-11:3