Transcript: lnc-RGS9-3:2

Basic information

LNCipedia transcript ID: lnc-RGS9-3:2 
LNCipedia gene ID: lnc-RGS9-3
Location (hg38): chr17:64881122-64892840
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 210 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA585:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -224.4405 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RGS9-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC037487.1-3:4
4.1 lnc-AC037487.1-3:4
5.0 lnc-AC037487.1-3:4
5.1 lnc-TANC2-60:1
5.2 lnc-RGS9-3:2