Transcript: lnc-RHBDD1-6:9

Basic information

LNCipedia transcript ID: lnc-RHBDD1-6:9 
LNCipedia gene ID: lnc-RHBDD1-6
Location (hg38): chr2:226814027-226815368
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1280 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT077189; FPKM1_group_18410_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -202.763 non-coding 
CPAT coding probability 7.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RHBDD1-6:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RHBDD1-2:1
4.0 lnc-RHBDD1-2:1
4.1 lnc-RHBDD1-3:14
5.0 lnc-RHBDD1-3:14
5.1 lnc-SP140-36:13
5.2 lnc-RHBDD1-6:9