Transcript: lnc-RICTOR-54:5

Basic information

LNCipedia transcript ID: lnc-RICTOR-54:5 
HGNC Gene Symbol: lnc-RICTOR-54    
HGNC Full Gene Name: OSMR antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000249740
Ensembl Transcript ID: ENST00000513480
Location (hg38): chr5:38736055-38845768
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 583 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000513480; ENST00000513480.1; CTD-2127H9.1-001; OTTHUMT00000367002.1; NONHSAT101104
Alternative gene names: ENSG00000249740; CTD-2127H9.1; ENSG00000249740.1; OTTHUMG00000162040.1; OSMR-AS1; ; ENSG00000249740.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -31.6691 non-coding 
CPAT coding probability 8.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RICTOR-54:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC091435.1-1:2
3.1 lnc-AC091435.1-1:2
4.0 OSMR-AS1:4
4.1 OSMR-AS1:4
5.0 OSMR-AS1:4
5.1 lnc-SELENOP-54:5
5.2 lnc-RICTOR-54:5