Transcript: lnc-RIPK3-1:1

Basic information

LNCipedia transcript ID: lnc-RIPK3-1:1 
LNCipedia gene ID: lnc-RIPK3-1
Location (hg38): chr14:24365347-24366546
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1200 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000020511.1|ENCT00000131680.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -43.2096 non-coding 
CPAT coding probability 3.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RIPK3-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RIPK3-1:1
5.0 lnc-RIPK3-1:1
5.1 lnc-EFS-55:1
5.2 lnc-RIPK3-1:1