Transcript: lnc-RIPOR1-1:8

Basic information

LNCipedia transcript ID: lnc-RIPOR1-1:8 
LNCipedia gene ID: lnc-RIPOR1-1
Location (hg38): chr16:67481404-67506689
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 15204 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000270049.1|ENCT00000159858.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 27.2735 non-coding 
CPAT coding probability 11.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RIPOR1-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM65A-1:13
5.0 lnc-FAM65A-1:13
5.1 lnc-NOL3-29:8
5.2 lnc-RIPOR1-1:8