Transcript: lnc-RIPOR2-21:1

Basic information

LNCipedia transcript ID: lnc-RIPOR2-21:1 
LNCipedia gene ID: lnc-RIPOR2-21
Location (hg38): chr6:25245355-25261411
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 746 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000413898.1; RP3-522P13.3-001; OTTHUMT00000040041.1; NONHSAT108147
Alternative gene names: ENSG00000235733.1; RP3-522P13.3; OTTHUMG00000014389.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.7409 non-coding 
CPAT coding probability 1.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RIPOR2-21:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CMAHP-2:1
4.0 lnc-CMAHP-2:1
4.1 lnc-CMAHP-2:1
5.0 lnc-CMAHP-2:1
5.1 lnc-C6orf62-21:1
5.2 lnc-RIPOR2-21:1