Transcript: lnc-RIPOR2-21:2

Basic information

LNCipedia transcript ID: lnc-RIPOR2-21:2 
LNCipedia gene ID: lnc-RIPOR2-21
Location (hg38): chr6:25245356-25261411
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 745 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017
Alternative transcript names: ENST00000413898.2
Alternative gene names: ENSG00000235733.2; RP3-522P13.3; AL024509.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.7409 non-coding 
CPAT coding probability 1.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RIPOR2-21:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CMAHP-2:2
4.0 lnc-CMAHP-2:2
4.1 lnc-CMAHP-2:2
5.0 lnc-CMAHP-2:2
5.1 lnc-C6orf62-21:2
5.2 lnc-RIPOR2-21:2