Transcript: lnc-RIPOR2-21:6

Basic information

LNCipedia transcript ID: lnc-RIPOR2-21:6 
LNCipedia gene ID: lnc-RIPOR2-21
RefSeq ID: NR_110862
Location (hg38): chr6:25244916-25261407
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1181 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110862.1
Alternative gene names: LOC101928663


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.7409 non-coding 
CPAT coding probability 0.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RIPOR2-21:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-C6orf62-21:6
5.1 lnc-C6orf62-21:6
5.2 lnc-RIPOR2-21:6