Transcript: lnc-RLN3-2:1

Basic information

LNCipedia transcript ID: lnc-RLN3-2:1 
LNCipedia gene ID: lnc-RLN3-2
Ensembl Gene ID: ENSG00000275091
Ensembl Transcript ID: ENST00000622575
Location (hg38): chr19:14006422-14006773
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 352 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000622575.1
Alternative gene names: ENSG00000275091.1; CTB-55O6.13; AC022098.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -69.9494 non-coding 
CPAT coding probability 1.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RLN3-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RLN3-2:1
4.1 lnc-RLN3-2:1
5.0 lnc-RLN3-2:1
5.1 lnc-ZNF763-41:1
5.2 lnc-RLN3-2:1