Transcript: lnc-RNASE4-1:1

Basic information

LNCipedia transcript ID: lnc-RNASE4-1:1 
LNCipedia gene ID: lnc-RNASE4-1
Location (hg38): chr14:20633001-20633365
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 359 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000018197.1|ENCT00000122888.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -223.7971 non-coding 
CPAT coding probability 13.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNASE4-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RNASE4.1-1:1
5.0 lnc-RNASE4.1-1:1
5.1 lnc-OR4K15-23:1
5.2 lnc-RNASE4-1:1