Transcript: lnc-RNASE6-1:1

Basic information

LNCipedia transcript ID: lnc-RNASE6-1:1 
LNCipedia gene ID: lnc-RNASE6-1
Ensembl Gene ID: ENSG00000258810
Ensembl Transcript ID: ENST00000556624
Location (hg38): chr14:20783888-20784293
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 294 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000556624.1; RP11-219E7.1-001; OTTHUMT00000411332.1; NONHSAT035609
Alternative gene names: ENSG00000258810.1; RP11-219E7.1; OTTHUMG00000171036.1; AL133371.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -73.3874 non-coding 
CPAT coding probability 1.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNASE6-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RNASE6-1:1
4.0 lnc-RNASE6-1:1
4.1 lnc-RNASE6-1:1
5.0 lnc-RNASE6-1:1
5.1 lnc-OR4K15-29:1
5.2 lnc-RNASE6-1:1