Transcript: lnc-RNASEH1-12:2

Basic information

LNCipedia transcript ID: lnc-RNASEH1-12:2 
LNCipedia gene ID: lnc-RNASEH1-12
Location (hg38): chr2:3561289-3575109
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 9646 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000047487.1|HBMT00000797831.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 73.0347 coding 
CPAT coding probability 2.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RNASEH1-12:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RNASEH1-1:3
5.0 lnc-RNASEH1-1:3
5.1 lnc-RAD51AP2-178:2
5.2 lnc-RNASEH1-12:2