Transcript: lnc-RNF13-3:2

Basic information

LNCipedia transcript ID: lnc-RNF13-3:2 
LNCipedia gene ID: lnc-RNF13-3
RefSeq ID: NR_036538
Location (hg38): chr3:149971279-149973242
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1964 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT092666; NR_036538; NR_036538.1
Alternative gene names: LOC646903


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.5728 non-coding 
CPAT coding probability 6.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNF13-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RNF13-3:2
4.0 lnc-RNF13-3:2
4.1 lnc-RNF13-3:2
5.0 lnc-RNF13-3:2
5.1 lnc-TM4SF4-7:3
5.2 lnc-RNF13-3:2