Transcript: lnc-RNF13-3:5

Basic information

LNCipedia transcript ID: lnc-RNF13-3:5 
LNCipedia gene ID: lnc-RNF13-3
Location (hg38): chr3:149971297-149981630
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3355 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000242791.2|MICT00000252294.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.6828 non-coding 
CPAT coding probability 3.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNF13-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RNF13-3:5
5.0 lnc-RNF13-3:5
5.1 lnc-TM4SF4-7:4
5.2 lnc-RNF13-3:5