Transcript: lnc-RNF138-2:1

Basic information

LNCipedia transcript ID: lnc-RNF138-2:1 
LNCipedia gene ID: lnc-RNF138-2
Ensembl Gene ID: ENSG00000274275
Ensembl Transcript ID: ENST00000620744
Location (hg38): chr18:32031035-32031359
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 325 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000620744.1
Alternative gene names: ENSG00000274275.1; RP11-326K13.5; AC009831.4; AC009831.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -314.3486 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNF138-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RNF138-1:1
4.1 lnc-RNF138-2:1
5.0 lnc-RNF138-2:1
5.1 lnc-RIOK3-90:1
5.2 lnc-RNF138-2:1