Transcript: lnc-RNF215-1:1

Basic information

LNCipedia transcript ID: lnc-RNF215-1:1 
LNCipedia gene ID: lnc-RNF215-1
Location (hg38): chr22:30374941-30377873
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1443 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000332468.4; RP1-130H16.16-001; OTTHUMT00000320941.1
Alternative gene names: ENSG00000241528.1; RP1-130H16.16; OTTHUMG00000151008.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.3087 non-coding 
CPAT coding probability 23.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNF215-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RNF215-1:1
4.0 lnc-RNF215-1:1
4.1 lnc-RNF215-1:1
5.0 lnc-RNF215-1:1
5.1 lnc-PLA2G3-20:2
5.2 lnc-RNF215-1:1