Transcript: lnc-RNF215-1:2

Basic information

LNCipedia transcript ID: lnc-RNF215-1:2 
LNCipedia gene ID: lnc-RNF215-1
RefSeq ID: NR_046312
Location (hg38): chr22:30368811-30377905
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 7605 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT084775; NR_046312; NR_046312.1
Alternative gene names: KIAA1656


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 74.1424 coding 
CPAT coding probability 11.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RNF215-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RNF215-1:2
4.0 lnc-RNF215-1:2
4.1 lnc-RNF215-1:2
5.0 lnc-RNF215-1:2
5.1 lnc-PLA2G3-20:1
5.2 lnc-RNF215-1:2