Transcript: lnc-RNF26-1:12

Basic information

LNCipedia transcript ID: lnc-RNF26-1:12 
LNCipedia gene ID: lnc-RNF26-1
Location (hg38): chr11:119729646-119736882
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 374 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019497; NONHSAT024686
Alternative gene names: XLOC_009299; linc-OAF-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -169.8038 non-coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNF26-1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CTD-2523D13.1.1-1:3
3.1 lnc-CTD-2523D13.1.1-1:4
4.0 lnc-CTD-2523D13.1.1-1:4
4.1 lnc-CTD-2523D13.1.1-1:4
5.0 lnc-CTD-2523D13.1.1-1:4
5.1 lnc-HINFP-10:11
5.2 lnc-RNF26-1:12