Transcript: lnc-RNF39-13:4

Basic information

LNCipedia transcript ID: lnc-RNF39-13:4 
LNCipedia gene ID: lnc-RNF39-13
Location (hg38): chr6:29924592-29925651
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1060 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT108563
Alternative gene names: HCGIV-6; HCGIV.5; HCGIV-06; bCX67J3.3; Em:AB023056.16; bPG309N1.1; bQB90C11.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -40.9589 non-coding 
CPAT coding probability 1.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNF39-13:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RNF39-11:4
4.0 HCG4B:4
4.1 HCG4B:4
5.0 HCG4B:4
5.1 lnc-SFTA2-31:4
5.2 lnc-RNF39-13:4