Transcript: lnc-RNF39-4:5
Basic information
LNCipedia transcript ID: lnc-RNF39-4:5
LNCipedia gene ID: lnc-RNF39-4
Location (hg38): chr6:30001011-30061144
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3270 bp
Exons: 12
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000376797; ENST00000376797.3; ZNRD1-AS1-006; OTTHUMT00000253083.1; NONHSAT108577; ENST00000376797.7
Alternative gene names: ENSG00000204623; ZNRD1-AS1; ENSG00000204623.4; OTTHUMG00000031109.3; ENSG00000204623.8
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Available literature
- Guo (2015), Expression quantitative trait loci in long non-coding RNA ZNRD1-AS1 influence cervical cancer development., Am J Cancer Res
- Wen (2015), Expression quantitative trait loci in long non-coding RNA ZNRD1-AS1 influence both HBV infection and hepatocellular carcinoma development., Mol. Carcinog.
- Yang (2015), Expression profile of long non-coding RNAs is altered in endometrial cancer., Int J Clin Exp Med
- Yin (2015), Expression Quantitative Trait Loci for CARD8 Contributes to Risk of Two Infection-Related Cancers--Hepatocellular Carcinoma and Cervical Cancer., PLoS ONE
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
1.3 | lnc-RNF39-1:5 |
3.1 | lnc-RNF39-4:5 |
4.0 | lnc-RNF39-4:5 |
4.1 | lnc-RNF39-4:5 |
5.0 | lnc-RNF39-4:5 |
5.1 | lnc-SFTA2-30:28 |
5.2 | lnc-RNF39-4:5 |