Transcript: lnc-RNFT1-2:1

Basic information

LNCipedia transcript ID: lnc-RNFT1-2:1 
LNCipedia gene ID: lnc-RNFT1-2
Location (hg38): chr17:60008128-60019052
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1948 bp
Exons: 12
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000407042.3
Alternative gene names: ENSG00000267104.1; TBC1D3P1-DHX40P1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 189.5465 coding 
CPAT coding probability 99.96% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RNFT1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC005702.1-2:1
4.0 lnc-AC005702.1-2:1
4.1 lnc-AC005702.1-2:1
5.0 lnc-AC005702.1-2:1
5.1 lnc-TUBD1-2:1
5.2 lnc-RNFT1-2:1