Transcript: lnc-RNFT2-1:7

Basic information

LNCipedia transcript ID: lnc-RNFT2-1:7 
LNCipedia gene ID: lnc-RNFT2-1
Location (hg38): chr12:116661544-116715969
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2849 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000257883.1|MICT00000087264.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -49.2032 non-coding 
CPAT coding probability 3.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNFT2-1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RNFT2-1:7
5.0 lnc-RNFT2-1:7
5.1 lnc-MAP1LC3B2-1:8
5.2 lnc-RNFT2-1:7